PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16990
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 172aa    MW: 19092.7 Da    PI: 7.3905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16990genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83e-092468250
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                 +kGVr++  + rWv+e+r+p   +k++r++lg+   +e+ a aaia r
  PEQU_16990 24 IFKGVRQRN-SDRWVCEVREP---NKKTRIWLGTIPPHEMRAGAAIALR 68
                59****999.7******9998...347*******999999999999865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.2E-52353IPR001471AP2/ERF domain
CDDcd000187.74E-192379No hitNo description
SuperFamilySSF541713.01E-102478IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-182479IPR001471AP2/ERF domain
SMARTSM003804.6E-132483IPR001471AP2/ERF domain
PROSITE profilePS5103212.2862477IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MTVSSAPPKR RAGRTKFRET RHPIFKGVRQ RNSDRWVCEV REPNKKTRIW LGTIPPHEMR  60
AGAAIALRGR SACLNFADSP ARLPIPESSS PRDIQRAAVA AAEAFRPGRM EAESSSSAAA  120
EMRVDDPFCM ELGMVDYYLD MAEGMLIDPP PMPSEEEGDG SNCDVSLWSH SF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919216.12e-69PREDICTED: dehydration-responsive element-binding protein 1G
SwissprotQ8H2739e-54DRE1E_ORYSJ; Dehydration-responsive element-binding protein 1E
SwissprotA2XWL69e-54DRE1E_ORYSI; Dehydration-responsive element-binding protein 1E
TrEMBLQ0ZDH42e-69Q0ZDH4_ELAGV; CBF-like transcription factor 1
TrEMBLQ0ZDH62e-69Q0ZDH6_ELAOL; CBF-like transcription factor
STRINGGSMUA_Achr11P21630_0012e-64(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-48C-repeat-binding factor 4